Practical Genomic Data Examples

Observable notebooks

The ASCAT Copy-Number Segmentation notebook provides a comprehensive and fully documented example of using GenomeSpy with genomic data.

The Annotation Tracks notebooks explains how to implement a chromosome ideogram and a fancy gene annotation track.

Website examples

The genomespy.app main page showcases several examples, some of which focusing on genomic data.

• GWAS Manhattan Plot (spec)
• Multiple-Sequence Alignment (spec)
• Structural Variants (spec)
• Multiple Cell Lines (spec)