GenomeSpy

GenomeSpy is a tool for building interactive genome visualizations.
It provides a Vega-Lite inspired visualization grammar and WebGL-powered rendering.

Documentation

Playground

GitHub

MSc thesis

The award-winning ISMB 2020 poster and talk.

Example Visualizations

Use the mouse wheel (or two fingers up/down on trackpad) to zoom in the examples:

ASCAT CNV segmentation

SegmentModel Spy (for GATK)

1000 samples from TCGA-BRCA

GWAS, OCAC-HGSOC

Other

© Kari Lavikka, follow me on Twitter!