A visualization grammar and a GPU-accelerated rendering engine for genomic (and other) data.
Use GenomeSpy to make your own visualizations!
GenomeSpy builds upon the concepts originally introduced in The Grammar Of Graphics and later implemented in ggplot2 and Vega-Lite. The building blocks that GenomeSpy provides allow users to build tailored, interactive genomic visualizations, which can be embedded on web pages or within JavaScript applications. The carefully crafted GPU-accelerated rendering engine guarantees smoothly animated interactions and a pleasant user experience for end users. Scroll down for live examples.
The application is still under construction, and a stable version is yet to be released. Nevertheless, feel free to try GenomeSpy out with your own data using the Playground app or an Observable notebook! Please let me know if you use GenomeSpy for something serious and follow me on Twitter for updates:
Copyright © 2019-2023 Kari Lavikka
GenomeSpy is developed in The Systems Biology of Drug Resistance in Cancer group at the University of Helsinki.
This project has received funding from the European Union's Horizon 2020 Research and Innovation Programme under Grant agreement No. 667403 (HERCULES) and No. 965193 (DECIDER)