Derive the data needed by a rainfall plot — rainfall_data • MutGlyph

Derive the data needed by a rainfall plot

Usage

rainfall_data(
  maf,
  tsb = NULL,
  detectChangePoints = FALSE,
  ref.build = "hg19",
  color = NULL
)

Arguments

maf: A maftools MAF object.
tsb: One tumor sample barcode. The most mutated sample is used by default.
detectChangePoints: Detect potential kataegis loci.
ref.build: Reference assembly: "hg18", "hg19", or "hg38".
color: Optional named substitution-class colors.

Value

A list containing mutation points, optional kataegis loci, colors, the selected sample, and assembly.